pystallone 1.0.0b6

This package is a Python binding for the Stallone Java library, which is an effort to combine multiple tools for building Markov models from molecular trajectory data.

It provides a high level API for:

• wrapping data (trajectories, math structures)

• (linear) algebra

• discretize MD trajectories

• perform coordinate transformations

• multiple methods for estimate Markov models

• generate trajectories from potential

• free energy estimation

• …

For more information have a look at the current Stallone website: http://github.com/markovmodel/pystallone