Skip to main content

Pytest fixtures for REANA.

Project description

https://img.shields.io/pypi/pyversions/pytest-reana.svg https://github.com/reanahub/pytest-reana/workflows/CI/badge.svg https://readthedocs.org/projects/pytest-reana/badge/?version=latest https://codecov.io/gh/reanahub/pytest-reana/branch/master/graph/badge.svg https://badges.gitter.im/Join%20Chat.svg https://img.shields.io/github/license/reanahub/pytest-reana.svg https://img.shields.io/badge/code%20style-black-000000.svg

About

pytest-REANA is a component of the REANA reusable and reproducible research data analysis platform. It provides pytest fixtures and test utilities.

Features

  • pytest fixtures

  • mocking OpenAPI client with request format validation

  • mocking Advanced Message Queuing Protocol consumers and producers

  • mocking Celery tasks

  • mocking file system workspace access

  • mocking database access

  • includes sample workspace directory

Usage

The detailed information on how to install and use REANA can be found in docs.reana.io.

Changes

Version 0.8.1 (2022-01-05)

  • Adds support for Python 3.10.

Version 0.8.0 (2021-11-22)

  • Adds nested Yadage workflow specification fixture.

  • Adds empty workflow workspaces for sample workflows by default.

  • Adds internal representation of a scatter-gather Snakemake workflow fixture.

  • Changes tmp_shared_volume_path fixture to be configurable through environment variable.

  • Changes fixtures to run with the full workspace path stored in the database.

  • Removes support for Python 2.

Version 0.7.2 (2021-07-02)

  • Changes internal dependencies to remove click.

Version 0.7.1 (2021-03-17)

  • Adds support for Python 3.9.

  • Fixes minor code warnings.

  • Fixes installation by upgrading REANA-DB version.

Version 0.7.0 (2020-10-20)

  • Adds new __reana database schema for db fixture.

  • Fixes a problem related to duplicated database session.

  • Changes code formatting to respect black coding style.

  • Changes documentation to single-page layout.

Version 0.6.0 (2019-12-19)

  • Adds fixtures for secrets store.

  • Centralises test requirements.

  • Adds Python 3.8 support.

Version 0.5.0 (2019-04-16)

  • Makes workspace path configurable for the sample_workflow_workspace fixture through the path parameter.

  • Adds sample_serial_workflow_in_db fixture.

  • Exposes previously hidden sample_yadage_workflow_in_db fixture.

  • Adds missing database session close in session fixture.

  • Adds helpers to represent starting and requeueing job conditions, sample_condition_for_starting_queued_workflows and sample_condition_for_requeueing_workflows.

Version 0.4.1 (2018-11-06)

  • Adds directory including sample workspace data.

Version 0.4.0 (2018-11-06)

  • Initial public release.

Project details


Release history Release notifications | RSS feed

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

pytest-reana-0.9.0a1.tar.gz (32.8 kB view details)

Uploaded Source

File details

Details for the file pytest-reana-0.9.0a1.tar.gz.

File metadata

  • Download URL: pytest-reana-0.9.0a1.tar.gz
  • Upload date:
  • Size: 32.8 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.6.0 importlib_metadata/4.6.3 pkginfo/1.7.1 requests/2.27.0 requests-toolbelt/0.9.1 tqdm/4.62.1 CPython/3.10.2

File hashes

Hashes for pytest-reana-0.9.0a1.tar.gz
Algorithm Hash digest
SHA256 d2383aa666073c01fa2669443728c36952e04346d1f27080b1bff34a134a41cb
MD5 f0bd4f5bc6005a27169ed98a2250e374
BLAKE2b-256 b89ebb52f660ae6d9f337fdb3b60402112090dc785c99cce59756d5f244f24c9

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page