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Pytest fixtures for REANA.

Project description

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About

pytest-REANA is a component of the REANA reusable and reproducible research data analysis platform. It provides pytest fixtures and test utilities.

Features

  • pytest fixtures

  • mocking OpenAPI client with request format validation

  • mocking Advanced Message Queuing Protocol consumers and producers

  • mocking Celery tasks

  • mocking file system workspace access

  • mocking database access

  • includes sample workspace directory

Usage

The detailed information on how to install and use REANA can be found in docs.reana.io.

Changes

Version 0.9.0 (UNRELEASED)

  • Changes black code formatter version.

  • Fixes location of Celery docs for ReadTheDocs pages.

Version 0.8.1 (2022-01-05)

  • Adds support for Python 3.10.

Version 0.8.0 (2021-11-22)

  • Adds nested Yadage workflow specification fixture.

  • Adds empty workflow workspaces for sample workflows by default.

  • Adds internal representation of a scatter-gather Snakemake workflow fixture.

  • Changes tmp_shared_volume_path fixture to be configurable through environment variable.

  • Changes fixtures to run with the full workspace path stored in the database.

  • Removes support for Python 2.

Version 0.7.2 (2021-07-02)

  • Changes internal dependencies to remove click.

Version 0.7.1 (2021-03-17)

  • Adds support for Python 3.9.

  • Fixes minor code warnings.

  • Fixes installation by upgrading REANA-DB version.

Version 0.7.0 (2020-10-20)

  • Adds new __reana database schema for db fixture.

  • Fixes a problem related to duplicated database session.

  • Changes code formatting to respect black coding style.

  • Changes documentation to single-page layout.

Version 0.6.0 (2019-12-19)

  • Adds fixtures for secrets store.

  • Centralises test requirements.

  • Adds Python 3.8 support.

Version 0.5.0 (2019-04-16)

  • Makes workspace path configurable for the sample_workflow_workspace fixture through the path parameter.

  • Adds sample_serial_workflow_in_db fixture.

  • Exposes previously hidden sample_yadage_workflow_in_db fixture.

  • Adds missing database session close in session fixture.

  • Adds helpers to represent starting and requeueing job conditions, sample_condition_for_starting_queued_workflows and sample_condition_for_requeueing_workflows.

Version 0.4.1 (2018-11-06)

  • Adds directory including sample workspace data.

Version 0.4.0 (2018-11-06)

  • Initial public release.

Project details


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