pyymw16 2.0.1

[](https://travis-ci.org/telegraphic/pyymw16)
[](https://www.gnu.org/licenses/lgpl-3.0)
[](https://codecov.io/gh/telegraphic/pyymw16)

# PyYMW16
_A Python / C++ Version of YMW16 electron-density model_

This is a Python / C++ port of the Yao, Manchester and Wang (2017, [Astrophys. J., 835, 29](https://iopscience.iop.org/article/10.3847/1538-4357/835/1/29/meta);
[arXiv:1610.09448](https://arxiv.org/abs/1610.09448)) YMW16 electron density model.
The code uses [pybind11](https://pybind11.readthedocs.io/en/stable/intro.html)
to create Python bindings to the (C++ ported) YMW16 code.

### Usage

Some usage examples can be found in the [examples directory](https://github.com/telegraphic/pyymw16/tree/master/examples).

```python
import pyymw16

# calculate DM at a given distance
DM, tau_sc = pyymw16.dist_to_dm(204.0, -6.5, 200)

# calculate distance for a given sky position and DM
dist, tau_sc = pyymw16.dm_to_dist(123.4, 4.0, 200)

# calculate N_e density at xyz galactocentric coordinates
ne = pyynmw16.calculate_electron_density_xyz(1.0, 2.0, 3.0)

# calculate N_e density at Galactic lat/long/distance coords
ne = pyynmw16.calculate_electron_density_lbr(204.0, -6.5, 3000.0)

```

The methods return astropy [Quantities](http://docs.astropy.org/en/stable/units/quantity.html#quantity), which have units attached, and can accept astropy [Angles](http://docs.astropy.org/en/stable/coordinates/angles.html#working-with-angles) and Quantities as arguments:

```python
import pyymw16
import astropy.units as u
import astropy.coordinates as c
DM = u.Quantity(10.0, unit='pc cm^-3')
ra, dec = c.Angle(23.0, unit='hourangle'), c.Angle('-43:00:02', unit='degree')
sky_coords = c.SkyCoord(ra, dec, frame='icrs')
dist, tau_sc = pyymw16.dm_to_dist(sky_coords.galactic.l, sky_coords.galactic.b, DM)

print(dist.to('lyr'))
>> 3362.16343117 lyr
print(tau_sc.to('ns'))
>> 7.758686138 ns
```


### Installation

Requires pybind11, astropy, and a newish C compiler with C++11 support (Ubuntu 16.04+ default gcc will work).

You should be able to install with:

```
pip install git+https://github.com/telegraphic/pyymw16
```

Or, download this repository and install via

```
python setup.py install
```

To run unit tests, run `python setup.py test`. Note that these tests only check the Python bindings, not the underlying C source code.

## YMW16 C README

YMW16 is a model for the distribution of free electrons in the Galaxy,
the Magellanic Clouds and the inter-galactic medium, that can be used
to estimate distances for real or simulated pulsars and fast radio
bursts (FRBs) based on their position and dispersion measure.

The Galactic model is based on 189 pulsars that have independently
determined distances as well as dispersion measures, whereas simpler
models are used for the electron density in the MC and the IGM. It is
estimated that the 95% of predicted Galactic pulsar distances will
have a relative error of less than a factor of 0.9. Pulse broadening
due to scattering in the Galactic interstellar medium, the Magellanic
Clouds, the intergalactic medium and FRB host galaxies is estimated.

As well as the ymw16 dm-distance program, we also provide a program,
ymw16_ne, which gives the electron density at any point in the Galaxy
or Magellanic Clouds.

A paper (Yao, Manchester and Wang, 2017, [Astrophys. J., 835, 29](https://iopscience.iop.org/article/10.3847/1538-4357/835/1/29/meta);
[arXiv:1610.09448](https://arxiv.org/abs/1610.09448)) describes the model and compares its predictions
with those of earlier Galactic electron density models. YMW16 is the
first electron-density model to estimate extragalactic pulsar
distances and FRB distances.

To make a command-line executable version of the program, download and
unpack the latest version of the program. Then run "make_ymw16" to
create the executable. The environment variable YMW16_DIR may be set
up to point at a directory containing ymw16par.txt and
spiral.txt. Access to these files is needed at runtime.

Websites allowing interactive access to the YMW16 distance model and
download of the latest program version are available at
http://www.xao.ac.cn/ymw16/,
http://www.atnf.csiro.au/research/pulsar/ymw16/ and
https://bitbucket.org/psrsoft/ymw16/.

Please report any issues or bugs at
https://bitbucket.org/psrsoft/ymw16/issues/new/ or directly to the
authors. Please provide an example illustrating the problem.

### YMW16 C LICENSE

```
Copyright (C) 2016, 2017 J. M. Yao, R. N. Manchester, N. Wang.

YMW16 is free software: you can redistribute it and/or modify　it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.

YMW16 is distributed in the hope that it will be useful,　but WITHOUT
ANY WARRANTY; without even the implied warranty of　MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the　GNU General Public License,
available at http://www.gnu.org/licenses/, for more details.

Jumei Yao (yaojumei _@_ xao.ac.cn), Richard N Manchester
(dick.manchester _@_ csiro.au), Na Wang (na.wang _@_ xao.ac.cn)
```