Single-Cell Analysis in Python.

Navigation

Verified details

These details have been verified by PyPI
Maintainers
Avatar for falexwolf from gravatar.com falexwolf Avatar for flyingsheep from gravatar.com flyingsheep Avatar for ivirshup from gravatar.com ivirshup

Unverified details

These details have not been verified by PyPI
Project links
Meta
Classifiers

Project description

Stars PyPI PyPIDownloads BiocondaDownloads Docs Build Status

Scanpy – Single-Cell Analysis in Python

Scanpy is a scalable toolkit for analyzing single-cell gene expression data built jointly with anndata. It includes preprocessing, visualization, clustering, trajectory inference and differential expression testing. The Python-based implementation efficiently deals with datasets of more than one million cells.

Discuss usage on Discourse. Read the documentation. If you’d like to contribute by opening an issue or creating a pull request, please take a look at our contributing guide. If Scanpy is useful for your research, consider citing Genome Biology (2018).

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for falexwolf from gravatar.com falexwolf Avatar for flyingsheep from gravatar.com flyingsheep Avatar for ivirshup from gravatar.com ivirshup

Unverified details

These details have not been verified by PyPI
Project links
Meta
Classifiers

Release history Release notifications | RSS feed

1.10.4

1.10.3

1.10.2

1.10.1

1.10.0

1.10.0rc2 pre-release

1.10.0rc1 pre-release

1.9.8

1.9.7

1.9.6

1.9.5

1.9.4

1.9.3

1.9.2

1.9.1

1.9.0

1.8.2

1.8.1

1.8.0

1.7.2

1.7.1

1.7.0

1.7.0rc1 pre-release

1.6.1

1.6.0

This version

1.5.1

1.5.0

1.5.0a1 pre-release

1.4.6

1.4.5.1

1.4.5.post3

1.4.5.post2

1.4.5.post1

1.4.5

1.4.4.post1

1.4.4

1.4.3

1.4.2

1.4.1

1.4

1.3.8

1.3.7

1.3.6

1.3.5

1.3.4

1.3.3

1.3.2

1.3.1

1.3

1.2.2

1.2.1

1.2.0

1.1

1.1a2 pre-release

1.1a1 pre-release

1.0.4

1.0.3.post1

1.0.3

1.0.2

1.0.1.post1

1.0.1

1.0

0.4.4

0.4.3

0.4.2

0.4.1

0.4

0.3.2

0.3.1

0.3

0.2.9.1

0.2.9

0.2.8

0.2.7

0.2.6

0.2.5

0.2.4

0.2.3.5

0.2.3.4

0.2.3

0.2.1

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

scanpy-1.5.1.tar.gz (7.1 MB view details)

Uploaded Source

Built Distribution

scanpy-1.5.1-py3-none-any.whl (7.2 MB view details)

Uploaded Python 3

File details

Details for the file scanpy-1.5.1.tar.gz.

File metadata

  • Download URL: scanpy-1.5.1.tar.gz
  • Upload date:
  • Size: 7.1 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.1.1 pkginfo/1.5.0.1 requests/2.23.0 setuptools/46.0.0 requests-toolbelt/0.9.1 tqdm/4.45.0 CPython/3.7.7

File hashes

Hashes for scanpy-1.5.1.tar.gz
Algorithm Hash digest
SHA256 e65bc5ad1cd3e709827e7ae058273477cb0d8aa0cd3ab46493642f3870291f4a
MD5 cf71fbfcdcdb68c812fd87fd05d3f958
BLAKE2b-256 8b4eced010813c0bf7210c5b7cab67cd68d973142ae6a7a68a9acab2d3d77a20

See more details on using hashes here.

File details

Details for the file scanpy-1.5.1-py3-none-any.whl.

File metadata

  • Download URL: scanpy-1.5.1-py3-none-any.whl
  • Upload date:
  • Size: 7.2 MB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.1.1 pkginfo/1.5.0.1 requests/2.23.0 setuptools/46.0.0 requests-toolbelt/0.9.1 tqdm/4.45.0 CPython/3.7.7

File hashes

Hashes for scanpy-1.5.1-py3-none-any.whl
Algorithm Hash digest
SHA256 d7dec83142b06791d5aec6c4da0791422ef6c8aa2c35e8b9f28bba3bfe7defa9
MD5 f04c8609becfd3a44755ec8324b50bf5
BLAKE2b-256 eb8333131aeae2065c2ab89fd2c4d57ea47f4c87c85517c5dc8e359f37b76ed1

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page