Single-Cell Analysis in Python.

Navigation

Verified details

These details have been verified by PyPI
Maintainers
Avatar for falexwolf from gravatar.com falexwolf Avatar for flyingsheep from gravatar.com flyingsheep Avatar for ivirshup from gravatar.com ivirshup

Unverified details

These details have not been verified by PyPI
Project links
Meta
Classifiers

Project description

Stars PyPI PyPIDownloads BiocondaDownloads Docs Build Status

Scanpy – Single-Cell Analysis in Python

Scanpy is a scalable toolkit for analyzing single-cell gene expression data built jointly with anndata. It includes preprocessing, visualization, clustering, trajectory inference and differential expression testing. The Python-based implementation efficiently deals with datasets of more than one million cells.

Discuss usage on Discourse. Read the documentation. If you’d like to contribute by opening an issue or creating a pull request, please take a look at our contributing guide. If Scanpy is useful for your research, consider citing Genome Biology (2018).

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for falexwolf from gravatar.com falexwolf Avatar for flyingsheep from gravatar.com flyingsheep Avatar for ivirshup from gravatar.com ivirshup

Unverified details

These details have not been verified by PyPI
Project links
Meta
Classifiers

Release history Release notifications | RSS feed

1.10.4

1.10.3

1.10.2

1.10.1

1.10.0

1.10.0rc2 pre-release

1.10.0rc1 pre-release

1.9.8

1.9.7

1.9.6

1.9.5

1.9.4

1.9.3

1.9.2

1.9.1

1.9.0

1.8.2

1.8.1

1.8.0

This version

1.7.2

1.7.1

1.7.0

1.7.0rc1 pre-release

1.6.1

1.6.0

1.5.1

1.5.0

1.5.0a1 pre-release

1.4.6

1.4.5.1

1.4.5.post3

1.4.5.post2

1.4.5.post1

1.4.5

1.4.4.post1

1.4.4

1.4.3

1.4.2

1.4.1

1.4

1.3.8

1.3.7

1.3.6

1.3.5

1.3.4

1.3.3

1.3.2

1.3.1

1.3

1.2.2

1.2.1

1.2.0

1.1

1.1a2 pre-release

1.1a1 pre-release

1.0.4

1.0.3.post1

1.0.3

1.0.2

1.0.1.post1

1.0.1

1.0

0.4.4

0.4.3

0.4.2

0.4.1

0.4

0.3.2

0.3.1

0.3

0.2.9.1

0.2.9

0.2.8

0.2.7

0.2.6

0.2.5

0.2.4

0.2.3.5

0.2.3.4

0.2.3

0.2.1

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

scanpy-1.7.2.tar.gz (10.2 MB view details)

Uploaded Source

Built Distribution

scanpy-1.7.2-py3-none-any.whl (10.3 MB view details)

Uploaded Python 3

File details

Details for the file scanpy-1.7.2.tar.gz.

File metadata

  • Download URL: scanpy-1.7.2.tar.gz
  • Upload date:
  • Size: 10.2 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/3.9.0 pkginfo/1.6.1 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.59.0 CPython/3.8.6

File hashes

Hashes for scanpy-1.7.2.tar.gz
Algorithm Hash digest
SHA256 ad5e7afdf1948753cd27f6f27ee904df1ce455855eec8520985effe86c53c630
MD5 d05ffe02ade8eb97323d692e51c351b0
BLAKE2b-256 f37d28db11d2a4f6482c9d90fcb3034be6a25636bc7c1b416fee3e38b1456a1b

See more details on using hashes here.

File details

Details for the file scanpy-1.7.2-py3-none-any.whl.

File metadata

  • Download URL: scanpy-1.7.2-py3-none-any.whl
  • Upload date:
  • Size: 10.3 MB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/3.9.0 pkginfo/1.6.1 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.59.0 CPython/3.8.6

File hashes

Hashes for scanpy-1.7.2-py3-none-any.whl
Algorithm Hash digest
SHA256 68912549d9108d8f22fddada9f5deb51b5ec4637420fb80b9e15341bf03db650
MD5 fabc92dd889bbd055dc3907470e5d4d9
BLAKE2b-256 e21e9541172c6a0923fdc522e5bbbee8fdfff5363cec2544c23b24e52c504f9b

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page