Finding shortest genome segments that regulate metabolic pathways
Project description
Installation
============
You can install shogen by running::
$ pip install shogen
Usage
=====
Typical usage is::
$ shogen.py [options] genomefile metabolismfile catalysationfile queries
Options:
-h, --help show this help message and exit
-k K, --k=K Number of ranked shortest genome segments (Default to 5)
-l L, --l=L maximum length of a genome segment (Default to 200)
============
You can install shogen by running::
$ pip install shogen
Usage
=====
Typical usage is::
$ shogen.py [options] genomefile metabolismfile catalysationfile queries
Options:
-h, --help show this help message and exit
-k K, --k=K Number of ranked shortest genome segments (Default to 5)
-l L, --l=L maximum length of a genome segment (Default to 200)
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