sourmash_plugin_venn: generate a simple Venn diagram for two sourmash sketches

Generate Venn diagrams showing overlaps between two sourmash sketches of DNA or protein sequences:

Examples

sourmash scripts venn examples/a.sig.gz examples/b.sig.gz -o a-b.png

sourmash scripts venn examples/a.sig.gz examples/b.sig.gz -o a-b.png --name1 A --name2 B

sourmash scripts venn examples/a.sig.gz examples/b.sig.gz examples/c.sig.gz -o a-b-c.png 

sourmash scripts venn examples/a.sig.gz examples/b.sig.gz examples/c.sig.gz -o a-b-c.png --name1 A --name2 B --name3 C

Installation

pip install sourmash_plugin_venn

Dev docs

venn is developed at https://github.com/sourmash-bio/sourmash_plugin_venn.

Testing

Run:

pytest tests

Generating a release

Bump version number in pyproject.toml and push.

Make a new release on github.

Then pull, and:

python -m build

followed by twine upload dist/....