A relion star mrcs stack class
Project description
## starstack: CryoEM Particle stars and stack Management in Python
# Overview The ParticlesStarSet class provides an efficient way to manage a set of particles in cryo-electron microscopy (cryoEM). It allows for easy reading and manipulation of STAR files and associated .mrcs image stacks. The library also offers utilities for creating subsets and saving them back to disk.
# Features
Read STAR files and associated .mrcs particle stacks. Create new STAR files and .mrcs particle stacks. Support for creating subsets of particles. Support for particle stack file handling.
# Dependencies mrcfile numpy pandas starfile
# Installation pip install git+https://github.com/rsanchezgarc/starstack
# Usage Reading STAR Files
` from starstack import ParticlesStarSet pset = ParticlesStarSet("my_file.star", particlesDir="Particles/") `
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
File details
Details for the file starstack-0.2.7.tar.gz.
File metadata
- Download URL: starstack-0.2.7.tar.gz
- Upload date:
- Size: 13.7 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/5.1.1 CPython/3.9.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 0322cdeef3b1c4a18c87e12f753fc013ad16f1d5020a6e602d00bdd9a87a12f8 |
|
| MD5 | a23dfd800055c088beb2ee58cc5fc723 |
|
| BLAKE2b-256 | 106579808f1ea337a1b521ae13724dd7ea860a9a7b75c02f212e971209b099bf |
Provenance
File details
Details for the file starstack-0.2.7-py3-none-any.whl.
File metadata
- Download URL: starstack-0.2.7-py3-none-any.whl
- Upload date:
- Size: 14.3 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/5.1.1 CPython/3.9.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | c44f738cac2f531431a35f07078a018907b52836db18ba319c4beb43c7a9cf2f |
|
| MD5 | e1b13819f7bd5b700f45f481519a14eb |
|
| BLAKE2b-256 | f7f6bce7e9d52560de9dcb61e4038e76d1169f414d91d3967c8a5752502b05d1 |
