starstack

A relion star mrcs stack class

Project description

## starstack: CryoEM Particle stars and stack Management in Python

#O verview The ParticlesStarSet class provides an efficient way to manage a set of particles in cryo-electron microscopy (cryoEM). It allows for easy reading and manipulation of STAR files and associated .mrcs image stacks. The library also offers utilities for creating subsets and saving them back to disk.

# Features

Read STAR files and associated .mrcs particle stacks. Create new STAR files and .mrcs particle stacks. Support for creating subsets of particles. Support for particle stack file handling.

# Dependencies mrcfile numpy pandas starfile

# Installation pip install git+https://github.com/rsanchezgarc/starstack

# Usage Reading STAR Files

` from starstack import ParticlesStarSet pset = ParticlesStarSet("my_file.star", particlesDir="Particles/") `

Project details

Release history Release notifications | RSS feed

0.2.7

Aug 1, 2024

0.2.6

Jun 19, 2024

0.2.5

May 28, 2024

0.2.4

Feb 27, 2024

0.2.3

Feb 27, 2024

0.2.0

Jan 12, 2024

0.1.12

Jan 12, 2024

0.1.11

Nov 3, 2023

0.1.9

Oct 23, 2023

0.1.8

Oct 11, 2023

0.1.7

Sep 17, 2023

0.1.6

Sep 11, 2023

0.1.4

Aug 31, 2023

0.1.3

Aug 30, 2023

0.1.2

Aug 28, 2023

This version

0.1.1

Aug 28, 2023

0.1

Aug 28, 2023

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