The schema of 3Di schematization files
Project description
threedi-schema
The schema of 3Di schematisation files.
This project exposes:
A ThreediDatabase object to interact with schematisation files.
A ModelSchema object (ThreediDatabase().schema) for adapting schema versions (called “migration”).
The 3Di schema as SQLAlchemy models and python Enum classes.*
*This package exposes SQLAlchemy models of the schematisation files directly. A minor release of this package may change these models and will be backwards incompatible. If the SQLAlchemy models are used, we strongly advise to fix the minor version as follows: threedi-schema==0.214.*. Otherwise, just fixing the major version is sufficient.
Example
The following code sample shows how you can upgrade a schematisation file:
from threedi_schema import ThreediDatabase db = ThreediDatabase("<Path to your sqlite file>") db.schema.upgrade()
The following code sample shows how you can list Channel objects:
from threedi_schema import models # NB: Ensure that you pin the minor version of threedi-schema # when using models (or constants). channels = db.get_session().query(models.Channel).all()
Command-line interface
Migrate to the latest schema version:
threedi_schema -s path/to/model.sqlite migrate
Ensure presence of spatial indexes:
threedi_schema -s path/to/model.sqlite index
Installation
Install with:
$ pip install threedi-schema
Changelog of threedi-schema
0.227.4 (unreleased)
Implement changes for schema version 300 concerning 1D
Remove v2 prefix from table names v2_channel, v2_windshielding, v2_cross_section_location, v2_pipe, v2_culvert` v2_orifice and v2_weir
Move data from v2_cross_section_definition to linked tables (cross_section_location, pipe, culvert, orifice and weir)
Move data from v2_manhole to connection_nodes and remove v2_manhole table
Rename v2_pumpstation to pump and add table pump_map that maps the end nodes to pumps
Remove tables v2_floodfill and v2_cross_section_definition
0.227.3 (2024-11-04)
Extend list of file paths that are replaced with the file name with the files in vegetation_drag_2d”
0.227.2 (2024-10-23)
Fix setting of model_settings.use_interception in migration to 0.222
0.227.1 (2024-10-21)
Propagate changes from 0.226.7
0.227.0 (2024-10-14)
Remove measure_variable column from tables memory_control and table_control
Rename control_measure_map to measure_map and control_measure_location to measure_location
0.226.7 (2024-10-21)
Add several models that where missing in DECLARED_MODELS
0.226.6 (2024-10-03)
Copy id column when renaming tables.
0.226.5 (2024-09-30)
Prevent migrations 225 and 226 from failing when any of the new table names already exists
Propagate changes from 0.225.6.
0.226.4 (2024-09-25)
Propagate fixes from 224.
0.226.3 (2024-09-24)
Propagate fixes from 224.5
0.226.2 (2024-09-23)
Release including fixes for 0.224.4 and 0.225.3
0.226.1 (2024-09-12)
Set type of dry_weather_flow.dry_weather_flow_distribution_id to integer (https://github.com/nens/threedi-schema/pull/90)
0.226.0 (2024-09-10)
Implement changes for schema version 300 concerning 2d and 1d2d
Renamed v2_dem_average_area to dem_average_area, v2_exchange_line to echange_line, v2_grid_refinement to grid_refinement_line, v2_grid_refinement_area to grid_refinement_area, v2_obstacle to obstacle and v2_potential_breach to potential_breach
Ensure that all these tables have a geom, code, display_name and tags column
Ensure that all columns except for geom are nullable
Rename refinement_level to grid_level in grid_refinement_line and grid_refinement_area
Rename potential_breach.exchange_level to initial_exchange_level
Remove potential_breach.maximum_breach_depth and set maximum_breach_depth.final_exchange_level to exchange_level - maximum_breach_depth
0.225.6 (2024-09-30)
Fix incorrect left join in migration 0.225.0
0.225.5 (2024-09-25)
Propagate fixes from 224.6
0.225.4 (2024-09-24)
Propagate fixes from 224.5
0.225.3 (2024-09-23)
Use unique name for temp tables in migrations
0.225.2 (2024-09-12)
Set type of dry_weather_flow.dry_weather_flow_distribution_id to integer (https://github.com/nens/threedi-schema/pull/90)
0.225.1 (2024-09-09)
Create enum for 1d_advection_type and use use that for PhysicalSettings.use_advection_1d
0.225.0 (2024-09-09)
Rename v2_1d_boundary_conditions and v2_2d_boundary_conditions to boundary_condition_1d and boundary_condition_2d.
Rename v2_1d_laterals and v2_2d_laterals to lateral_1d and lateral_2d.
Rename the_geom to geom in boundary_condition_2d and lateral_2d, and add geom columns to boundary_condition_1d and lateral_1d.
Drop all constraints on boundary condition and lateral tables, except NOT NULL constrains on id and geom.
0.224.7 (2024-09-30)
Prevent migration 222 to 224 from failing when any of the new table names already exists
Swap start and end of control_measure_map geometries
Modify geometry of controls associated with pumpstation to the pumpstation start node
Ensure control_measure_map.geom is a valid line
0.224.6 (2024-09-25)
Ensure dry_weather_flow_map.geom and surface_map.geom are valid lines
0.224.5 (2024-09-24)
Do not migrate controls that refer to non-existing nodes
0.224.4 (2024-09-23)
Use unique name for temp tables in migrations
0.224.3 (2024-09-12)
Set type of dry_weather_flow.dry_weather_flow_distribution_id to integer
0.224.2 (2024-09-05)
Change names of aggregation_settings.flow_variable to match threedigrid
Make renaming raster paths more resilient
Fix setting default values in dry_weather_flow and surface
Actually set geom columns in dry_weather_flow_map and surface_map
0.224.1 (2024-09-02)
Fix creating control_measure_map.geom in 224 migration
Handle created Null geometries when migrating surface / impervious_surface
Revert removing on customized load_spatialite function
Remove unused columns from several settings tables
Rename groundwater.equilibrium_infiltration_rate_type to equilibrium_infiltration_rate_aggregation
Rename control_measure_location.object_id to connection_node_id
Replace paths to raster files with the file name
0.224.0 (2024-08-16)
Implement changes for schema version 300 concerning structure control.
Simplify schema to four tables (control_measure_location, control_measure_map, memory_control and table_control) and removing tables v2_control, v2_control_delta, v2_control_measure_group, v2_control_measure_map and v2_control_pid.
Removed time control and corresponding table (v2_control_timed).
Add geometries to all four tables (with optional display name and tags).
A full overview can be obtained from the migration code (threedi_schema/migrations/versions/0224_db_upgrade_structure_control.py)
0.223 (2024-08-01)
Implement changes for schema version 300 concerning inflow
Replace v2_surface and v2_impervious_surface (and maps) with surface and dry_weather_flow tables
Redistribute data from v2_surface or v2_impervious_surface, depending on simulation_template_settings.use_0d_inflow, over suface and dry_weather_flow tables
Populate surface_parameters and dry_weather_flow_distribution tables with default data
A full overview can be obtained from the migration code (threedi_schema/migrations/versions/0223_upgrade_db_inflow.py)
0.222.2 (2024-06-13)
Skip testing convert to geopackage
0.222.1 (2024-06-13)
Disable convert_to_geopackage in schema.upgrade for schema version before 300
Ensure revision format in schema.upgrade is correctly formatted
0.222.0 (2024-05-22)
Implement changes for schema version 300 concerning simulation settings
Reduce all settings tables to a single row. Multiple settings per schematisation are no longer allowed.
- A full overview can most easily be obtained from the migration code (threedi_schema/migrations/versions/0222_upgrade_db_settings.py); to summarize:
Rename settings tables from “v2_foo” to “foo”
Rename several columns in settings tables
Move settings to context specific tables instead of a single generic table
0.221 (2024-04-08)
Remove column vegetation_drag_coeficients from v2_cross_section_location (sqlite only) that was added in migration 218
0.220 (2024-02-29)
Add support for geopackage
Remove the_geom_linestring from v2_connection_nodes because geopackage does not support multiple geometry objects in one table
0.219.3 (2024-04-16)
Fix not setting views when using upgrade with upgrade_spatialite_version=True on up to date spatialite
0.219.2 (2024-04-04)
Update v2_cross_section_location_view with vegetation columns
0.219.1 (2024-01-30)
Fix migration to nullable friction_value that resulted in string type for friction_value.
Update action versions to use a new NodeJS.
Make CrossSectionLocation.friction_value nullable
0.218.0 (2024-01-08)
Add parameters vegetation_stem_density, vegetation_stem_diameter, vegetation_height and vegetation_drag_coefficient to CrossSectionLocation
Add parameters friction_values, vegetation_stem_densities, vegetation_stem_diameters, vegetation_heights and vegetation_drag_coefficients to CrossSectionDefinition
0.217.13 (2023-10-02)
Change set_gate_height to set_gate_level
0.217.12 (2023-10-02)
Add set_gate_height to control structure options.
Set timed control column restrictions similar to table control.
0.217.11 (2023-09-19)
Fix conveyance values list.
0.217.10 (2023-09-19)
Unmark conveyance columns as beta.
Move zest.releaser config to pyproject.toml.
0.217.9 (2023-08-16)
Fix incorrectly formatted beta_features.py.
0.217.8 (2023-08-15)
Mark friction types with conveyance as beta features.
0.217.7 (2023-07-28)
Don’t set journal_mode to MEMORY since it causes the schema version field to not be updated, making migrations crash.
0.217.6 (2023-07-13)
Extend FrictionType enum with Chézy friction with conveyance and Manning friction with conveyance.
0.217.5 (2023-06-15)
Fixed set_views (spatialite metadata tables wwere not updated).
0.217.4 (2023-06-15)
Fix SQLAlchemy engine and connection usage.
Do not pool connections (solving file permission denied issues on Windows).
0.217.3 (2023-06-12)
Added groundwater 1D2D columns to the views.
0.217.2 (2023-05-24)
Remove vegetation and groundwater settings from beta features, since they are going to be released.
0.217.1 (2023-05-17)
Rewrite release workflow to use a supported github action for github release.
Build the threedi-schema release with the build package instead of setuptools.
0.217.0 (2023-05-08)
Rename vegetation columns to match raster options.
0.216.4 (2023-04-11)
Fixed libspatialite 4.3 incompatibility (introduced in 0.216.3).
0.216.3 (2023-04-04)
Fixed DROP TABLE in migration 214 (tables “v2_connected_pnt”, “v2_calculation_point”, “v2_levee” remained present). The DROP TABLE is emitted again in migration 216.
0.216.2 (2023-03-24)
Remove groundwater columns from beta columns for 1d boundary conditions.
Check on vegetation drag settings id in global settings instead of vegetation drag id for beta columns.
0.216.1 (2023-03-23)
Add beta_features.py to contain a list of spatialite columns and values for columns still in beta status.
0.216.0 (2023-03-15)
Add v2_vegation_drag table.
Add 1D2D groundwater attributes to Pipes, Channels and Manholes
0.214.6 (2023-03-13)
Make timeseries non-nullable for BoundaryCondition1D and BoundaryConditions2D.
0.214.5 (2023-02-16)
Add SQLAlchemy 2.0 support and drop 1.3 support.
0.214.4 (2023-01-31)
Properly cleanup geo-tables in migration 214.
0.214.3 (2023-01-19)
Adapted versioning: prefix existing versions with 0.
Fixed deprecation warnings of Geoalchemy2 0.13.0
0.214.2 (2023-01-17)
Fixed packaging (also include migrations).
0.214.1 (2023-01-17)
Fixed packaging.
0.214.0 (2023-01-17)
Initial project structure created with cookiecutter and https://github.com/nens/cookiecutter-python-template
Ported code from threedi-modelchecker, rearranged into ‘domain’, ‘application’, ‘infrastructure’, ‘migrations’.
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