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Python API for efficient storage and retrieval of single-cell data using TileDB

Project description

Installation

This requires tiledb (see ./setup.cfg for version), in addition to other dependencies in setup.cfg.

After cd to apis/python:

pip install --editable .

Optionally, if you prefer, instead:

python -m venv venv
. ./venv/bin/activate
pip install .

Then:

python -m pytest tests

Status

Please see https://github.com/single-cell-data/TileDB-SingleCell/issues.

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