Pipeline for processing samples in context of rare mendelian diseases
Project description
Travail
Pipeline for processing samples in context of rare mendelian diseases.
How to install
Travail is a Python package that is hosted on PyPi and is meant to be used within a virtual environment, such as Anaconda.
To install travail into new Anaconda virtual environment named travail-env, run
# create the virtual environment
conda create -n travail-env python=3.7
# activate the environment after successful creation
conda activate travail-env
# install travail
pip install travail
How to run
After installation, travail executable should be available in your $PATH, when the travail-env is activated.
Run
travail --help
to see all the available options.
Check requirements
TODO - write text about the check requirements functionality
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