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This is a kit that provides the ability to read and write trajectory data in the Zarr file format

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zarrtraj

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Community License: GPL v2 Powered by MDAnalysis

This is an MDAKit that provides the ability to read and write H5MD-formatted trajectory data into MDAnalysis using Zarr. Zarrtraj can read local H5MD files, H5MD files in S3 buckets, and files served via http or https. It can read both H5MD-formatted files stored in hdf5 and H5MD-formatted files stored in Zarr (.zarrmd files).

For more information on installation and usage, see the zarrtraj documentation

zarrtraj is bound by a Code of Conduct.

Copyright

The zarrtraj source code is hosted at https://github.com/Becksteinlab/zarrtraj and is available under the GNU General Public License, version 2 (see the file LICENSE).

Copyright (c) 2024, Lawson Woods

Acknowledgements

Project based on the MDAnalysis Cookiecutter version 0.1. Please cite MDAnalysis when using zarrtraj in published work.

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