11 projects
Meneco
Metabolic Network Completion. Compute minimal completions to your draft network with reactions from a repair network.
caspo
Reasoning on the response of logical signaling networks with Answer Set Programming
precursor
Compute minimal metabolic precursors sets that enable the production of target metabolites.
exdesi
Design experiments to differentiate interaction graph models.
iggy
A tool for consistency based analysis of influence graphs and observed systems behavior.
pyasp
A convenience wrapper for the ASP tools gringo, gringo4 and clasp.
ingranalyze
Influence graph analysis, consistency check, diagnosis, repair and prediction.
meneco-gui
A graphical user interface for meneco.
modulefinder
A module finder.
shogen
Finding shortest genome segments that regulate metabolic pathways.
shogen2
Finding shortest genome segments that regulate metabolic pathways
