18 projects
nmdc-schema
Schema resources for the National Microbiome Data Collaborative (NMDC)
nmdc-submission-schema
The home of the NMDC submission schema. *Not* the home of sheets_and_friends. *Not* a GH pages host of NMDC DataHarmonizer interfaces.
sheets-and-friends
Enhance a LinkML model with imported and optionally modified slots
schemasheets
Package to author schemas using spreadsheets
schema-automator
toolkit that assists with generating LinkML schemas from existing serializations like JSON-schema
llm_github
Tools for extracting knowledge from GitHub issues, PR comments, etc.
exhaustion-check
gen-pop-linkml2sheets
cleanroom-schema
Cleanroom reboot of NMDC schema
synbio-schema
A schema for synthetic biology, inspired by IARPA FELIX
sheets-for-person-schema
Files for schemasheets exercises at ICBO 2022
mixs-linkml
A LinkML model for the MIxS standard
hident
linkml-model-enrichment
Infer models, enrich with meaning for terms including enum permissible values
crdch-model
CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH). This Python package contains the dataclasses necessary to build and operate over data objects according to the CRDC-H model.
iot-to-linkml
see https://github.com/microbiomedata/IoT_to_linkml
badexperiment
see https://github.com/turbomam/badexperiment
scoped-mapping
Use orthogonal data to determine what ontologies should be used for mapping strings
