25 projects
higlass-schema
Pydantic models for HiGlass
juv
A toolkit for reproducible Jupyter notebooks, powered by uv.
quak
None
gosling
Python bindings to generate Gosling visualizations
cev-metrics
Rust implementations of our embedding comparison metrics, exposed via Python bindings.
cev
comparative embedding visualization
signals
A reactive programming library for Python, implementing a signals system similar to @preact/signals
vizarr
None
anywidget
custom jupyter widgets made easy
ipymario
None
ipyniivue
A Jupyter Widget for Niivue based on anywidget.
with-coordination
Declarative coordinated multiple views for Jupyter Widgets
pygv
None
servir
an extensible async background server
tweakpane
Python bindings for Tweakpane UI
oxbow
Read specialized bioinformatic file formats into dataframes.
higlass-widget
A Jupyter Widget for HiGlass
simple-zarr-server
A simple server for sharing zarr over HTTP.
bgserve
an extensible async background server
higlass
Python bindings for HiGlass
napari-lazy-openslide
A plugin to lazily load multiscale whole-slide images with openslide and dask
gosling-widget
A Jupyter Widget for Gosling
napari-dzi-zarr
An experimental plugin for viewing Deep Zoom Images (DZI) with napari and zarr.
img2zarr
Python package for converting images to zarr chunked arrays.
deep-lincs
A framework for deep learning with LINCS L1000 Data
