10 projects
esm-efficient
Efficient Evolutionary Scale Modeling: Efficient and simplified implementation of protein language model for inference and training.
epiout
EpiOut: outlier detection for DNA accesibility data.
mmsplice
Predict splicing variant effect from VCF
lapa
Tools for alternative polyadenylation detection and analysis from diverse data sources (3'seq and long-reads) and transcript start site detection and analysis from long-read RNA-seq.
betabinomial
Beta Binomial test to detect aberration in count data
kipoiseq
kipoiseq: sequence-based data-loaders for Kipoi
fastbetabino3
concise
CONCISE (COnvolutional Neural for CIS-regulatory Elements)
metabolitics
metabolitics
sklearn_utils
Sklearn utils
