21 projects
nitransforms
NiTransforms -- Neuroimaging spatial transforms in Python.
pydra
Pydra dataflow engine
fmriprep-docker
A wrapper for generating Docker commands using regular fMRIPrep syntax
fmriprep
A robust and easy-to-use pipeline for preprocessing of diverse fMRI data
nibabies
Processing workflows for magnetic resonance images of the brain in infants
templateflow
TemplateFlow Python Client - TemplateFlow is the Zone of neuroimaging templates.
smriprep-docker
A wrapper for generating Docker commands using regular sMRIPrep syntax
smriprep
Structural MRI Preprocessing Pipelines
mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain.
mriqc-learn
Learning on MRIQC-generated image quality metrics (IQMs).
niworkflows
NeuroImaging Workflows provides processing tools for magnetic resonance images of the brain.
sdcflows
Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes.
eddymotion
Pure python eddy-current and head-motion correction for dMRI, an extension of QSIprep's SHOREline algorithm (Cieslak, 2020) to multiple diffusion models.
nipreps-versions
Version schemes for nipreps tools
nirodents
NeuroImaging Rodents (NiRodents) provides processing tools for magnetic resonance images of the rodent brain.
niflow-nipype1-workflows
niflow-nipype1-workflows workflow package
dmriprep
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data.
niflow-nipype1-examples
niflow-nipype1-examples workflow package
gridbspline
N-Dimensional, gridded, and multivariate data interpolation using splines
regseg
Python interface to RegSeg, a surface-driven registration method for the structure-informed segmentation of multispectral brain images
