22 projects
bonesis
Synthesis of Most Permissive Boolean Networks
colomoto-jupyter
CoLoMoTo helper functions for Juypter integration
ginsim
Python interface to GINsim and BioLQM API
maboss
A python and jupyter API for the MaBoSS software
mpbn
Simple implementation of Most Permissive Boolean networks
colomoto-docker
Helper script to run docker image colomoto/colomoto-docker
scBoolSeq
scBoolSeq: Linking scRNA-Seq Statistics and Boolean Dynamics.
erode-python
pypint
Python interface to Pint
modian
Simple python library for Boolean networks
mpbn-sim
Simulation of Most Permissive Boolean networks
caspo
Reasoning on the response of logical signaling networks with Answer Set Programming
profile-binr
PROFILE methodology for the binarisation and normalisation of RNA-seq data
donodo
Bridging Docker images with Zenodo
boolsim
Python interface to boolSim
satex
Helper script for managing SAT Heritage docker images
stablemotifs
Python interface to StableMotifs
caspo-control
Python wrapper for caspo control
actonet
Abduction-based control of Boolean networks fixpoints
cabean
Python interface to CABEAN, A Software Tool for the Control of Asynchronous Boolean Networks
algorecell-types
Generic types for reprogramming predictions from logical models
adys
Simple python library for Boolean networks