Perturbation Analysis in the scverse ecosystem.
Project description
pertpy
Documentation
Please read the documentation.
Installation
We recommend installing and running pertpy on a recent version of Linux (e.g. Ubuntu 24.04 LTS). No particular hardware beyond a standard laptop is required.
You can install pertpy in less than a minute via pip from PyPI:
pip install pertpy
if you want to use scCODA or tascCODA, please install pertpy as follows:
pip install 'pertpy[coda]'
If you want to use the differential gene expression interface, please install pertpy by running:
pip install 'pertpy[de]'
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