Perturbation Analysis in the Scanpy ecosystem.
Project description
pertpy
Features
- Differential cell type perturbation analysis with Augurpy
- Analysis of CRISPR-KO screens with Mixscape
- Compositional analysis with Milo and tascCODA
Installation
You can install pertpy via pip from PyPI:
$ pip install pertpy
Usage
Please see Usage for details.
Credits
This package was created with cookietemple using Cookiecutter based on Hypermodern_Python_Cookiecutter.
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