Perturbation Analysis in the scverse ecosystem.

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  • License: MIT License (MIT)
  • Author: Lukas Heumos
  • Requires: Python >=3.8.0, <3.11
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Project description

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pertpy

Features

  • Differential cell type perturbation analysis with Augurpy
  • Analysis of CRISPR-KO screens with Mixscape
  • Compositional analysis with Milo and tascCODA

Installation

You can install pertpy via pip from PyPI:

$ pip install pertpy

Usage

Please see Usage for details.

Credits

This package was created with cookietemple using Cookiecutter based on Hypermodern_Python_Cookiecutter.

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Avatar for grst from gravatar.com grst Avatar for zethson from gravatar.com zethson

Unverified details

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  • License: MIT License (MIT)
  • Author: Lukas Heumos
  • Requires: Python >=3.8.0, <3.11
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0.9.4

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0.8.0

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0.4.0

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